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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_396: 8764 - K07478 ycaJ putative ATPase, at 921691 to 924142
8764
mRNA_397: 8765 - SUPERFAMILY--SSF52047, at 924312 to 925720
8765
mRNA_398: 8766 - KOG1305 Amino acid transporter protein, at 925990 to 928121
8766
mRNA_399: 8767 - K06874 K06874 zinc finger protein, at 928294 to 930157
8767
mRNA_400: 8768 - K00728 POMT dolichyl-phosphate-mannose-protein mannosyltransferase, at 930496 to 933710
8768
Group
Condition
mRNA_396
mRNA_397
mRNA_398
mRNA_399
mRNA_400
8764
8765
8766
8767
8768
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.1
-0.4
-1.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.1
0.5
-1.0
facs on lipid accumulation
Sorted High BODIPY Gate
-1.0
-0.3
0.4
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.1
0.2
-0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.3
0.1
-0.1
auxotrophy
YNB Glucose
-0.1
0.1
-0.1
0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.3
-0.0
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
0.2
0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
-0.2
0.4
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.1
0.4
-0.1
growth on ricinoleic acid
YNB Glucose
0.0
-0.1
0.4
0.2
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.2
0.2
0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.1
0.6
-0.2
0.3
auxotrophy
Dropout Complete
-0.1
0.3
-0.3
0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.5
0.0
0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.2
0.1
0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
0.8
0.1
-0.2
growth on ypd
YPD
0.4
-0.1
0.3
0.4
growth on oleic acid
YNB Glucose
0.2
0.2
0.1
0.8
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.8
-0.1
0.4
growth on oleic acid
YNB Oleic Acid
0.0
0.4
0.2
1.0
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