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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_386: 8754 - Hypothetical Protein, at 898444 to 900294
8754
mRNA_387: 8755 - Hypothetical Protein, at 900666 to 901434
8755
mRNA_388: 8756 - Hypothetical Protein, at 903533 to 904021
8756
mRNA_389: 8757 - HMMPfam-Vacuolar sorting protein 9 (VPS9) domain-PF02204,ProSiteProfiles-VPS9 domain profile.-PS51205,SUPERFAMILY--SSF109993, at 906859 to 910715
8757
mRNA_390: 8758 - K00869 E2.7.1.36, MVK, mvaK1 mevalonate kinase, at 910981 to 912334
8758
Group
Condition
mRNA_386
mRNA_387
mRNA_388
mRNA_389
mRNA_390
8754
8755
8756
8757
8758
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
0.0
-1.5
-0.5
auxotrophy
Dropout Complete
-0.3
0.5
-0.3
-0.6
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.2
0.1
-0.3
auxotrophy
YNB Glucose
-0.3
0.5
-0.1
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
-0.3
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.1
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.6
-0.4
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
-0.4
-0.2
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.0
0.3
-0.4
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.2
-0.1
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
0.9
-0.4
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.3
0.1
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.8
-0.1
-0.1
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.8
-0.6
0.0
0.5
growth on ypd
YPD
0.9
0.1
-0.1
-0.1
growth on oleic acid
YNB Oleic Acid
-0.2
0.9
-0.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
1.0
-0.5
-0.3
0.6
growth on oleic acid
YNB Glucose
-0.1
0.9
-0.1
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.9
0.4
-0.3
0.2
growth on ricinoleic acid
YNB Glucose
1.1
0.4
-0.2
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
1.3
0.3
-0.1
0.5
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