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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_370: 8738 - HMMPfam-RTC4-like domain-PF14474, at 859391 to 862171
8738
mRNA_371: 8739 - HMMPfam-Protein of unknown function (DUF2408)-PF10303, at 862374 to 864566
8739
mRNA_372: 8740 - BLAST arsenical pump membrane protein [Exophiala dermat..., at 864831 to 866823
8740
mRNA_373: 8741 - KOG2542 Uncharacterized conserved protein (YdiU family), at 866989 to 869456
8741
mRNA_374: 8742 - Hypothetical Protein, at 869694 to 870348
8742
Group
Condition
mRNA_370
mRNA_371
mRNA_372
mRNA_373
mRNA_374
8738
8739
8740
8741
8742
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.3
-0.4
-0.1
-1.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.3
-0.2
0.1
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-0.8
-0.4
0.2
-0.5
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.4
-0.1
0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.5
-0.1
-0.1
0.7
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.2
-0.2
0.0
0.3
growth on oleic acid
YNB Oleic Acid
-0.1
0.6
-0.0
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
-0.1
-0.4
-0.1
0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.1
-0.6
-0.3
0.8
growth on oleic acid
YNB Glucose
-0.3
0.3
0.0
0.1
0.4
growth on ypd
YPD
0.1
0.4
0.6
-0.1
-0.4
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.4
0.3
0.0
0.7
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.3
0.0
-0.4
1.8
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
1.0
-0.0
-0.3
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.3
0.1
-0.1
1.3
growth on ricinoleic acid
YNB Glucose
0.3
0.7
0.1
0.0
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.4
0.1
-0.2
1.4
auxotrophy
YNB Glucose 75mM Methionine
-0.4
0.6
0.1
-0.1
1.7
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
1.1
0.3
0.2
0.2
auxotrophy
Dropout Complete
0.1
0.4
0.0
-0.2
1.9
auxotrophy
YNB Glucose
-0.0
0.6
0.2
0.1
2.0
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