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Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_338: 8706 - Hypothetical Protein, at 798129 to 798620
8706
mRNA_339: 8707 - K01693 hisB imidazoleglycerol-phosphate dehydratase, at 798617 to 799510
8707
mRNA_340: 8708 - KOG1271 Methyltransferases, at 799973 to 801137
8708
mRNA_341: 8709 - K00860 cysC adenylylsulfate kinase, at 801326 to 802147
8709
mRNA_342: 8710 - SUPERFAMILY--SSF54285, at 802416 to 802761
8710
Group
Condition
mRNA_338
mRNA_339
mRNA_340
mRNA_341
mRNA_342
8706
8707
8708
8709
8710
auxotrophy
YNB Glucose
0.2
-0.4
-3.0
0.0
auxotrophy
YNB Glucose 75mM Arginine
0.3
-0.2
-3.0
0.0
growth on ricinoleic acid
YNB Glucose
0.2
-0.1
-2.8
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.6
-2.9
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
0.1
-2.4
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.8
0.3
-1.6
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.0
-2.0
-0.1
growth on oleic acid
YNB Glucose
0.2
0.3
-2.3
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
0.1
-1.0
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.6
-0.7
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.4
0.1
0.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.3
0.0
-0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.0
0.0
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.8
-0.3
-0.1
-0.6
auxotrophy
Dropout Complete
0.2
-0.3
-0.1
0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.3
0.2
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
0.8
-0.5
-0.0
auxotrophy
YNB Glucose 75mM Methionine
0.4
-0.3
-0.1
0.2
growth on oleic acid
YNB Oleic Acid
-0.1
0.4
-0.3
0.3
growth on ypd
YPD
0.4
0.3
0.1
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
0.6
1.1
-0.0
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