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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_336: 8704 - BLAST AGAP003941-PA [Anopheles gambiae str. PEST], at 795455 to 795670
8704
mRNA_337: 8705 - HMMPfam-Glycosyl hydrolases family 17-PF00332,SUPERFAMILY--SSF51445, at 795968 to 797601
8705
mRNA_338: 8706 - Hypothetical Protein, at 798129 to 798620
8706
mRNA_339: 8707 - K01693 hisB imidazoleglycerol-phosphate dehydratase, at 798617 to 799510
8707
mRNA_340: 8708 - KOG1271 Methyltransferases, at 799973 to 801137
8708
Group
Condition
mRNA_336
mRNA_337
mRNA_338
mRNA_339
mRNA_340
8704
8705
8706
8707
8708
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.4
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
0.0
-0.6
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.3
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.8
0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.2
0.4
-0.3
auxotrophy
YNB Glucose
0.2
0.2
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
0.1
0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
-0.3
-0.0
auxotrophy
Dropout Complete
0.2
0.2
-0.3
growth on ricinoleic acid
YNB Glucose
0.0
0.2
-0.1
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-0.0
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
-0.1
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.1
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.3
0.6
growth on oleic acid
YNB Glucose
-0.0
0.2
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
-0.2
0.6
ypd buoyancy
40 hrs No Buoyancy Separation
0.4
0.8
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
-0.2
0.8
growth on ypd
YPD
0.6
0.4
0.3
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