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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_330: 8698 - KOG2018 Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis, at 782807 to 784581
8698
mRNA_331: 8699 - K03940 NDUFS7 NADH dehydrogenase (ubiquinone) Fe-S protein 7, at 786269 to 787745
8699
mRNA_332: 8700 - HMMPfam-DSS1/SEM1 family-PF05160, at 788095 to 788775
8700
mRNA_333: 8701 - Hypothetical Protein, at 789358 to 791102
8701
mRNA_334: 8702 - K00938 E2.7.4.2, mvaK2 phosphomevalonate kinase, at 792166 to 794119
8702
Group
Condition
mRNA_330
mRNA_331
mRNA_332
mRNA_333
mRNA_334
8698
8699
8700
8701
8702
growth on oleic acid
YNB Oleic Acid
-0.5
-0.6
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.9
-0.7
0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.8
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.0
-0.3
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.7
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.6
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.6
-0.9
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.4
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.6
-0.1
growth on ricinoleic acid
YNB Glucose
0.2
-0.7
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.5
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
0.0
0.1
growth on oleic acid
YNB Glucose
0.3
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.4
-0.4
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.2
0.1
auxotrophy
Dropout Complete
-0.1
0.6
-0.2
auxotrophy
YNB Glucose
0.2
0.3
-0.1
growth on ypd
YPD
-0.3
0.6
0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
0.8
0.0
auxotrophy
YNB Glucose 75mM Arginine
0.4
0.6
0.0
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