Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_317: 8685 - HMMPfam-DnaJ domain-PF00226,PRINTS-DnaJ domain signature-PR00625,ProSitePatterns-Nt-dnaJ domain signature.-PS00636,ProSiteProfiles-dnaJ domain profile.-PS50076,ProSiteProfiles-IQ motif profile.-PS50096,SMART-DnaJ molecular chaperone homology domain-SM00271,SUPERFAMILY--SSF46565, at 756228 to 757512 8685 mRNA_318: 8686 - Interpro Fungal domain of unknown function (DUF1750), at 757594 to 759249 8686 mRNA_319: 8687 - KOG2134 Polynucleotide kinase 3' phosphatase, at 759335 to 760537 8687 mRNA_320: 8688 - Hypothetical Protein, at 760656 to 762781 8688 mRNA_321: 8689 - KOG4317 Predicted Zn-finger protein, at 762839 to 764616 8689
Group Condition mRNA_317 mRNA_318 mRNA_319 mRNA_320 mRNA_321
8685
8686
8687
8688
8689
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -1.5 -0.5 -0.4  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -1.3 0.2 -0.6  
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -1.8 0.2 -0.0  
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.9 -0.3 0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -1.3 0.4 -0.2  
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -1.3 0.3 0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.8 0.6 -0.3  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.6 0.6 -0.3  
growth on ricinoleic acid YNB Glucose 0.3 -0.6 -0.6 0.4  
ypd buoyancy 40 hrs High Buoyancy -0.2 0.2 -0.3 0.4  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.2 -0.3 0.3  
auxotrophy Dropout Complete 0.2 -0.3 -0.4 0.6  
auxotrophy YNB Glucose 75mM Methionine 0.3 -0.1 -0.5 0.3  
growth on ypd YPD 0.4 0.5 -0.3 -0.5  
auxotrophy YNB Glucose 0.1 -0.2 -0.3 0.6  
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 0.1 0.1  
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.0 0.2 0.3  
growth on oleic acid YNB Glucose -0.1 0.5 0.0 0.2  
growth on oleic acid YNB Oleic Acid -0.0 0.5 -0.3 0.4  
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 -0.1 -0.1 0.3  
auxotrophy YNB Glucose 75mM Arginine 0.6 0.9 -0.6 0.4  
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