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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_317: 8685 - HMMPfam-DnaJ domain-PF00226,PRINTS-DnaJ domain signature-PR00625,ProSitePatterns-Nt-dnaJ domain signature.-PS00636,ProSiteProfiles-dnaJ domain profile.-PS50076,ProSiteProfiles-IQ motif profile.-PS50096,SMART-DnaJ molecular chaperone homology domain-SM00271,SUPERFAMILY--SSF46565, at 756228 to 757512
8685
mRNA_318: 8686 - Interpro Fungal domain of unknown function (DUF1750), at 757594 to 759249
8686
mRNA_319: 8687 - KOG2134 Polynucleotide kinase 3' phosphatase, at 759335 to 760537
8687
mRNA_320: 8688 - Hypothetical Protein, at 760656 to 762781
8688
mRNA_321: 8689 - KOG4317 Predicted Zn-finger protein, at 762839 to 764616
8689
Group
Condition
mRNA_317
mRNA_318
mRNA_319
mRNA_320
mRNA_321
8685
8686
8687
8688
8689
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-1.5
-0.5
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
-1.3
0.2
-0.6
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-1.8
0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.9
-0.3
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-1.3
0.4
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-1.3
0.3
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.8
0.6
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.6
0.6
-0.3
growth on ricinoleic acid
YNB Glucose
0.3
-0.6
-0.6
0.4
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.2
-0.3
0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
-0.2
-0.3
0.3
auxotrophy
Dropout Complete
0.2
-0.3
-0.4
0.6
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.1
-0.5
0.3
growth on ypd
YPD
0.4
0.5
-0.3
-0.5
auxotrophy
YNB Glucose
0.1
-0.2
-0.3
0.6
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.0
0.1
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.0
0.2
0.3
growth on oleic acid
YNB Glucose
-0.1
0.5
0.0
0.2
growth on oleic acid
YNB Oleic Acid
-0.0
0.5
-0.3
0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
0.5
-0.1
-0.1
0.3
auxotrophy
YNB Glucose 75mM Arginine
0.6
0.9
-0.6
0.4
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