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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_305: 8673 - HMMPfam-Peroxisomal biogenesis factor 11 (PEX11)-PF05648, at 726265 to 727388
8673
mRNA_306: 8674 - HMMPfam-Relaxase/Mobilisation nuclease domain-PF03432,ProSiteProfiles-Tudor domain profile.-PS50304,SMART-Tudor domain-SM00333,SUPERFAMILY--SSF63748, at 727879 to 728992
8674
mRNA_307: 8675 - K12195 CHMP6, VPS20 charged multivesicular body protein 6, at 729336 to 730471
8675
mRNA_308: 8676 - K07952 ARFRP1 ADP-ribosylation factor related protein 1, at 730823 to 731905
8676
mRNA_309: 8677 - K00643 E2.3.1.37, ALAS 5-aminolevulinate synthase, at 732179 to 734206
8677
Group
Condition
mRNA_305
mRNA_306
mRNA_307
mRNA_308
mRNA_309
8673
8674
8675
8676
8677
growth on ricinoleic acid
YNB Ricinoleic Acid
-4.0
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-3.5
0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
-1.2
growth on oleic acid
YNB Oleic Acid
-1.8
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.8
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
-0.1
growth on ricinoleic acid
YNB Glucose
-0.5
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.4
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.3
auxotrophy
YNB Glucose
0.2
-0.1
growth on ypd
YPD
0.3
-0.2
growth on oleic acid
YNB Glucose
0.2
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.1
auxotrophy
Dropout Complete
0.5
0.1
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