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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_296: 8664 - K20177 VPS3, TGFBRAP1 vacuolar protein sorting-associated protein 3, at 698223 to 702275
8664
mRNA_297: 8665 - Hypothetical Protein, at 702591 to 702936
8665
mRNA_298: 8666 - KOG0725 Reductases with broad range of substrate specificities, at 705560 to 707244
8666
mRNA_299: 8667 - ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199, at 707483 to 708587
8667
mRNA_300: 8668 - BLAST transcription factor hoxa13 [Aspergillus bombycis], at 709223 to 712870
8668
Group
Condition
mRNA_296
mRNA_297
mRNA_298
mRNA_299
mRNA_300
8664
8665
8666
8667
8668
growth on ricinoleic acid
YNB Ricinoleic Acid
-2.0
0.3
-0.3
-4.8
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.3
0.4
-0.3
-4.2
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-5.1
-0.5
0.1
0.0
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-4.9
0.0
-0.1
0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-5.3
-0.3
0.1
0.2
0.1
growth on oleic acid
YNB Oleic Acid
-1.0
0.5
-0.0
-2.3
-0.3
growth on oleic acid
YNB Glucose
-1.2
0.3
0.1
-0.8
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.7
-0.3
-0.4
-0.2
-1.4
auxotrophy
YNB Glucose
-1.1
0.3
0.4
-0.4
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
-0.0
0.2
-0.3
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.6
0.2
0.4
-0.3
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
-0.1
0.2
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.8
-0.1
0.4
0.1
-0.0
auxotrophy
Dropout Complete
-0.6
0.2
0.3
-0.0
-0.3
ypd buoyancy
40 hrs Low Buoyancy
0.6
-0.2
-0.1
-0.1
-0.5
ypd buoyancy
40 hrs Median Buoyancy
0.7
0.0
-0.3
-0.3
-0.3
growth on ricinoleic acid
YNB Glucose
0.4
0.3
-0.1
-0.5
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.7
0.5
0.4
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.2
0.3
0.0
0.2
growth on ypd
YPD
0.5
0.4
-0.0
0.1
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
-0.2
0.1
0.6
0.3
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