Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_296: 8664 - K20177 VPS3, TGFBRAP1 vacuolar protein sorting-associated protein 3, at 698223 to 702275 8664 mRNA_297: 8665 - Hypothetical Protein, at 702591 to 702936 8665 mRNA_298: 8666 - KOG0725 Reductases with broad range of substrate specificities, at 705560 to 707244 8666 mRNA_299: 8667 - ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199, at 707483 to 708587 8667 mRNA_300: 8668 - BLAST transcription factor hoxa13 [Aspergillus bombycis], at 709223 to 712870 8668
Group Condition mRNA_296 mRNA_297 mRNA_298 mRNA_299 mRNA_300
8664
8665
8666
8667
8668
growth on ricinoleic acid YNB Ricinoleic Acid -2.0 0.3 -0.3 -4.8 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -1.3 0.4 -0.3 -4.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -5.1 -0.5 0.1 0.0 0.1
facs on lipid accumulation Sorted High BODIPY Gate -4.9 0.0 -0.1 0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -5.3 -0.3 0.1 0.2 0.1
growth on oleic acid YNB Oleic Acid -1.0 0.5 -0.0 -2.3 -0.3
growth on oleic acid YNB Glucose -1.2 0.3 0.1 -0.8 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.7 -0.3 -0.4 -0.2 -1.4
auxotrophy YNB Glucose -1.1 0.3 0.4 -0.4 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.0 0.2 -0.3 0.1
auxotrophy YNB Glucose 75mM Arginine -0.6 0.2 0.4 -0.3 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -0.1 0.2 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 -0.1 0.4 0.1 -0.0
auxotrophy Dropout Complete -0.6 0.2 0.3 -0.0 -0.3
ypd buoyancy 40 hrs Low Buoyancy 0.6 -0.2 -0.1 -0.1 -0.5
ypd buoyancy 40 hrs Median Buoyancy 0.7 0.0 -0.3 -0.3 -0.3
growth on ricinoleic acid YNB Glucose 0.4 0.3 -0.1 -0.5 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.7 0.5 0.4 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.2 0.3 0.0 0.2
growth on ypd YPD 0.5 0.4 -0.0 0.1 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 -0.2 0.1 0.6 0.3
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