Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_290: 8658 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSitePatterns-Sugar transport proteins signature 1.-PS00216,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 689147 to 690940 8658 mRNA_291: 8659 - K03012 RPB4, POLR2D DNA-directed RNA polymerase II subunit RPB4, at 691511 to 692003 8659 mRNA_292: 8660 - HMMPfam-Endoplasmic reticulum-based factor for assembly of V-ATPase-PF11712, at 692166 to 693130 8660 mRNA_293: 8661 - Hypothetical Protein, at 693672 to 694229 8661 mRNA_294: 8662 - Hypothetical Protein, at 694833 to 695851 8662
Group Condition mRNA_290 mRNA_291 mRNA_292 mRNA_293 mRNA_294
8658
8659
8660
8661
8662
growth on oleic acid YNB Glucose -0.1     -0.5  
ypd buoyancy 40 hrs Low Buoyancy -0.3     -0.4  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2     -0.7  
auxotrophy YNB Glucose 75mM Methionine 0.2     -0.6  
ypd buoyancy 40 hrs Median Buoyancy -0.1     -0.3  
facs on lipid accumulation Sorted No BODIPY Gate 0.5     -0.7  
ypd buoyancy 40 hrs High Buoyancy -0.2     -0.0  
growth on oleic acid YNB Oleic Acid 0.0     -0.2  
facs on lipid accumulation Sorted Low BODIPY Gate -0.0     -0.0  
auxotrophy YNB Glucose 75mM Arginine 0.2     -0.3  
auxotrophy Dropout Complete 0.0     -0.1  
growth on ricinoleic acid YNB Ricinoleic Acid 0.4     -0.4  
growth on ricinoleic acid YNB Glucose 0.4     -0.4  
auxotrophy YNB Glucose -0.0     0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3     0.4  
growth on ypd YPD 0.1     0.0  
facs on lipid accumulation Sorted High BODIPY Gate 0.4     -0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0     0.3  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2     0.5  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0     0.6  
ypd buoyancy 40 hrs No Buoyancy Separation 0.3     0.3  
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