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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
mRNA_289: 8657 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 686748 to 688788
8657
mRNA_290: 8658 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSitePatterns-Sugar transport proteins signature 1.-PS00216,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 689147 to 690940
8658
mRNA_291: 8659 - K03012 RPB4, POLR2D DNA-directed RNA polymerase II subunit RPB4, at 691511 to 692003
8659
mRNA_292: 8660 - HMMPfam-Endoplasmic reticulum-based factor for assembly of V-ATPase-PF11712, at 692166 to 693130
8660
mRNA_293: 8661 - Hypothetical Protein, at 693672 to 694229
8661
Group
Condition
mRNA_289
mRNA_290
mRNA_291
mRNA_292
mRNA_293
8657
8658
8659
8660
8661
growth on oleic acid
YNB Glucose
0.1
-0.1
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.2
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.5
-0.7
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.3
-0.4
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.2
-0.6
growth on oleic acid
YNB Oleic Acid
-0.1
0.0
-0.2
growth on ricinoleic acid
YNB Glucose
-0.2
0.4
-0.4
ypd buoyancy
40 hrs Median Buoyancy
0.3
-0.1
-0.3
auxotrophy
Dropout Complete
-0.1
0.0
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.2
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
0.4
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.0
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.4
-0.1
growth on ypd
YPD
-0.0
0.1
0.0
auxotrophy
YNB Glucose 75mM Arginine
0.2
0.2
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
-0.3
0.4
auxotrophy
YNB Glucose
0.3
-0.0
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.2
0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
0.3
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
-0.0
0.6
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