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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_268: 8636 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 642489 to 643919
8636
mRNA_269: 8637 - BLAST nitrogen assimilation transcription factor [Rhodo..., at 644049 to 645349
8637
mRNA_270: 8638 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 645622 to 646120
8638
mRNA_271: 8639 - K11262 ACACA acetyl-CoA carboxylase / biotin carboxylase 1, at 646438 to 653784
8639
mRNA_272: 8640 - KOG4178 Soluble epoxide hydrolase, at 654316 to 655397
8640
Group
Condition
mRNA_268
mRNA_269
mRNA_270
mRNA_271
mRNA_272
8636
8637
8638
8639
8640
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
0.8
-2.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
0.2
-1.9
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
0.1
-1.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
0.3
-1.8
ypd buoyancy
40 hrs High Buoyancy
-0.4
0.4
-1.4
auxotrophy
Dropout Complete
-0.1
-0.1
-0.9
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.0
-1.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.7
0.4
-2.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.5
-1.3
ypd buoyancy
40 hrs Median Buoyancy
-0.6
0.2
-0.5
growth on ypd
YPD
-0.2
-0.3
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.4
-0.2
growth on oleic acid
YNB Glucose
-0.3
-0.2
0.0
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.4
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
-0.3
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.2
0.2
growth on ricinoleic acid
YNB Glucose
-0.2
-0.1
0.3
auxotrophy
YNB Glucose
0.2
-0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.3
0.1
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.3
0.5
growth on oleic acid
YNB Oleic Acid
0.5
0.1
0.3
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