Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_266: 8634 - KOG0111 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, at 639859 to 640522 8634 mRNA_267: 8635 - K03381 catA catechol 1,2-dioxygenase, at 640868 to 642235 8635 mRNA_268: 8636 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 642489 to 643919 8636 mRNA_269: 8637 - BLAST nitrogen assimilation transcription factor [Rhodo..., at 644049 to 645349 8637 mRNA_270: 8638 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 645622 to 646120 8638
Group Condition mRNA_266 mRNA_267 mRNA_268 mRNA_269 mRNA_270
8634
8635
8636
8637
8638
facs on lipid accumulation Sorted High BODIPY Gate   -2.7 -0.5 0.1  
growth on oleic acid YNB Glucose   -1.9 -0.3 -0.2  
growth on ricinoleic acid YNB Ricinoleic Acid   -1.0 0.2 -0.3  
growth on ypd YPD   -0.6 -0.2 -0.3  
auxotrophy YNB Glucose 75mM Arginine   -0.4 -0.1 -0.4  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.6 -0.4 0.2  
facs on lipid accumulation Sorted No BODIPY Gate   -0.2 -0.3 -0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.7 0.4 -0.3  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -1.6 0.7 0.4  
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.6 -0.0 0.3  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.8 -0.1 0.5  
ypd buoyancy 40 hrs Median Buoyancy   -0.0 -0.6 0.2  
growth on ricinoleic acid YNB Glucose   0.2 -0.2 -0.1  
auxotrophy YNB Glucose   0.2 0.2 -0.2  
auxotrophy YNB Glucose 75mM Methionine   0.5 0.2 -0.4  
growth on oleic acid YNB Oleic Acid   -0.2 0.5 0.1  
auxotrophy Dropout Complete   0.6 -0.1 -0.1  
ypd buoyancy 40 hrs Low Buoyancy   -0.0 0.3 0.1  
ypd buoyancy 40 hrs High Buoyancy   0.6 -0.4 0.4  
facs on lipid accumulation Sorted Low BODIPY Gate   0.6 0.1 0.0  
ypd buoyancy 40 hrs No Buoyancy Separation   1.6 -0.7 0.8  
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