Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_265: 8633 - K00876 udk, UCK uridine kinase, at 637479 to 639717 8633 mRNA_266: 8634 - KOG0111 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, at 639859 to 640522 8634 mRNA_267: 8635 - K03381 catA catechol 1,2-dioxygenase, at 640868 to 642235 8635 mRNA_268: 8636 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 642489 to 643919 8636 mRNA_269: 8637 - BLAST nitrogen assimilation transcription factor [Rhodo..., at 644049 to 645349 8637
Group Condition mRNA_265 mRNA_266 mRNA_267 mRNA_268 mRNA_269
8633
8634
8635
8636
8637
facs on lipid accumulation Sorted High BODIPY Gate 0.1   -2.7 -0.5 0.1
growth on oleic acid YNB Glucose 0.5   -1.9 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3   -0.6 -0.4 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4   -1.6 0.7 0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.4   -1.0 0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1   -0.2 -0.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1   -0.7 0.4 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2   -0.6 -0.0 0.3
growth on ypd YPD 0.5   -0.6 -0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine 0.3   -0.4 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1   -0.8 -0.1 0.5
ypd buoyancy 40 hrs Median Buoyancy 0.1   -0.0 -0.6 0.2
growth on ricinoleic acid YNB Glucose 0.1   0.2 -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.1   0.5 0.2 -0.4
auxotrophy YNB Glucose 0.3   0.2 0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2   0.6 0.1 0.0
auxotrophy Dropout Complete 0.3   0.6 -0.1 -0.1
growth on oleic acid YNB Oleic Acid 0.4   -0.2 0.5 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.4   -0.0 0.3 0.1
ypd buoyancy 40 hrs High Buoyancy 0.4   0.6 -0.4 0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.0   1.6 -0.7 0.8
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