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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_262: 8630 - HMMPfam-Flavin reductase like domain-PF01613, at 628698 to 628997
8630
mRNA_263: 8631 - K01537 E3.6.3.8 Ca2+-transporting ATPase, at 629830 to 634837
8631
mRNA_264: 8632 - BLAST phosphoglycerate mutase-like protein [Sanghuangporus ..., at 636296 to 637192
8632
mRNA_265: 8633 - K00876 udk, UCK uridine kinase, at 637479 to 639717
8633
mRNA_266: 8634 - KOG0111 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, at 639859 to 640522
8634
Group
Condition
mRNA_262
mRNA_263
mRNA_264
mRNA_265
mRNA_266
8630
8631
8632
8633
8634
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
0.3
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.3
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.9
0.3
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.5
-0.1
0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
0.3
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.0
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.1
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.4
0.4
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.1
0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
1.0
-0.4
-0.1
growth on ricinoleic acid
YNB Glucose
1.0
-0.5
0.1
growth on ypd
YPD
-0.0
0.2
0.5
ypd buoyancy
40 hrs Median Buoyancy
0.5
0.1
0.1
growth on oleic acid
YNB Oleic Acid
0.5
-0.0
0.4
growth on oleic acid
YNB Glucose
0.6
-0.2
0.5
auxotrophy
Dropout Complete
0.6
-0.0
0.3
auxotrophy
YNB Glucose 75mM Methionine
1.0
-0.1
0.1
auxotrophy
YNB Glucose
1.1
-0.2
0.3
auxotrophy
YNB Glucose 75mM Arginine
1.1
0.1
0.3
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