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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_259: 8627 - HMMPfam-Domain of unknown function (DUF1771)-PF08590,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,ProSiteProfiles-Smr domain profile.-PS50828,SMART-zinc finger-SM00356, at 622490 to 625658
8627
mRNA_260: 8628 - KOG2534 DNA polymerase IV (family X), at 625910 to 627593
8628
mRNA_261: 8629 - KOG1745 Histones H3 and H4, at 627613 to 628433
8629
mRNA_262: 8630 - HMMPfam-Flavin reductase like domain-PF01613, at 628698 to 628997
8630
mRNA_263: 8631 - K01537 E3.6.3.8 Ca2+-transporting ATPase, at 629830 to 634837
8631
Group
Condition
mRNA_259
mRNA_260
mRNA_261
mRNA_262
mRNA_263
8627
8628
8629
8630
8631
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
-1.1
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
-0.9
-0.5
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
0.5
-0.1
-0.9
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.1
0.0
-1.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.6
0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
-0.3
-0.4
-0.3
growth on ypd
YPD
-0.2
-0.2
0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.1
-0.2
0.5
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.0
0.2
-0.5
auxotrophy
Dropout Complete
-0.1
-0.0
-0.6
0.6
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
0.2
0.1
-0.5
ypd buoyancy
40 hrs High Buoyancy
0.3
-0.1
0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.0
0.2
0.1
growth on oleic acid
YNB Glucose
-0.1
0.4
-0.0
0.6
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.1
-0.3
1.1
auxotrophy
YNB Glucose 75mM Methionine
0.4
-0.2
-0.3
1.0
growth on oleic acid
YNB Oleic Acid
0.2
0.3
0.2
0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
1.2
-0.1
0.1
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
1.0
0.1
-0.4
1.0
auxotrophy
YNB Glucose
0.2
0.1
0.3
1.1
growth on ricinoleic acid
YNB Glucose
0.8
0.1
0.3
1.0
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