Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_258: 8626 - HMMPfam-Eukaryotic protein of unknown function (DUF1764)-PF08576, at 621201 to 621954 8626 mRNA_259: 8627 - HMMPfam-Domain of unknown function (DUF1771)-PF08590,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,ProSiteProfiles-Smr domain profile.-PS50828,SMART-zinc finger-SM00356, at 622490 to 625658 8627 mRNA_260: 8628 - KOG2534 DNA polymerase IV (family X), at 625910 to 627593 8628 mRNA_261: 8629 - KOG1745 Histones H3 and H4, at 627613 to 628433 8629 mRNA_262: 8630 - HMMPfam-Flavin reductase like domain-PF01613, at 628698 to 628997 8630
Group Condition mRNA_258 mRNA_259 mRNA_260 mRNA_261 mRNA_262
8626
8627
8628
8629
8630
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.5 -1.1 -0.4  
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.0 -0.9 -0.5  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.2 -0.6 0.1  
auxotrophy Dropout Complete   -0.1 -0.0 -0.6  
ypd buoyancy 40 hrs Median Buoyancy   -0.3 -0.1 -0.2  
facs on lipid accumulation Sorted Low BODIPY Gate   0.4 -0.3 -0.4  
growth on ypd YPD   -0.2 -0.2 0.1  
auxotrophy YNB Glucose 75mM Arginine   0.1 -0.1 -0.3  
facs on lipid accumulation Sorted High BODIPY Gate   -0.6 0.5 -0.1  
auxotrophy YNB Glucose 75mM Methionine   0.4 -0.2 -0.3  
ypd buoyancy 40 hrs No Buoyancy Separation   0.2 -0.1 0.0  
ypd buoyancy 40 hrs High Buoyancy   0.3 -0.1 0.1  
growth on oleic acid YNB Glucose   -0.1 0.4 -0.0  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.2 -0.0 0.2  
ypd buoyancy 40 hrs Low Buoyancy   0.2 -0.0 0.2  
facs on lipid accumulation Sorted No BODIPY Gate   0.3 0.2 0.1  
auxotrophy YNB Glucose   0.2 0.1 0.3  
growth on ricinoleic acid YNB Methylricinoleic Acid   1.0 0.1 -0.4  
growth on oleic acid YNB Oleic Acid   0.2 0.3 0.2  
growth on ricinoleic acid YNB Glucose   0.8 0.1 0.3  
growth on ricinoleic acid YNB Ricinoleic Acid   1.2 -0.1 0.1  
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