Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
500 nt
mRNA_258: 8626 - HMMPfam-Eukaryotic protein of unknown function (DUF1764)-PF08576, at 621201 to 621954
8626
mRNA_259: 8627 - HMMPfam-Domain of unknown function (DUF1771)-PF08590,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,ProSiteProfiles-Smr domain profile.-PS50828,SMART-zinc finger-SM00356, at 622490 to 625658
8627
mRNA_260: 8628 - KOG2534 DNA polymerase IV (family X), at 625910 to 627593
8628
mRNA_261: 8629 - KOG1745 Histones H3 and H4, at 627613 to 628433
8629
mRNA_262: 8630 - HMMPfam-Flavin reductase like domain-PF01613, at 628698 to 628997
8630
Group
Condition
mRNA_258
mRNA_259
mRNA_260
mRNA_261
mRNA_262
8626
8627
8628
8629
8630
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
-1.1
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
-0.9
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.6
0.1
auxotrophy
Dropout Complete
-0.1
-0.0
-0.6
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
-0.3
-0.4
growth on ypd
YPD
-0.2
-0.2
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.1
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
0.5
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.4
-0.2
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.1
0.0
ypd buoyancy
40 hrs High Buoyancy
0.3
-0.1
0.1
growth on oleic acid
YNB Glucose
-0.1
0.4
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.0
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.0
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
0.2
0.1
auxotrophy
YNB Glucose
0.2
0.1
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
1.0
0.1
-0.4
growth on oleic acid
YNB Oleic Acid
0.2
0.3
0.2
growth on ricinoleic acid
YNB Glucose
0.8
0.1
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
1.2
-0.1
0.1
remove
mRNA_258
plot
remove
mRNA_259
plot
remove
mRNA_260
remove
mRNA_261
plot
remove
mRNA_262
plot