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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_256: 8624 - K11254 H4 histone H4, at 618548 to 619064
8624
mRNA_257: 8625 - KOG1745 Histones H3 and H4, at 619763 to 620480
8625
mRNA_258: 8626 - HMMPfam-Eukaryotic protein of unknown function (DUF1764)-PF08576, at 621201 to 621954
8626
mRNA_259: 8627 - HMMPfam-Domain of unknown function (DUF1771)-PF08590,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,ProSiteProfiles-Smr domain profile.-PS50828,SMART-zinc finger-SM00356, at 622490 to 625658
8627
mRNA_260: 8628 - KOG2534 DNA polymerase IV (family X), at 625910 to 627593
8628
Group
Condition
mRNA_256
mRNA_257
mRNA_258
mRNA_259
mRNA_260
8624
8625
8626
8627
8628
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.7
0.4
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
0.0
-0.9
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
-0.6
0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.9
-0.5
-1.1
facs on lipid accumulation
Sorted No BODIPY Gate
-1.1
0.3
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.6
-0.2
-0.6
growth on ypd
YPD
0.2
-0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.4
-0.3
-0.1
auxotrophy
Dropout Complete
0.1
-0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.0
0.1
-0.1
growth on oleic acid
YNB Oleic Acid
-0.4
0.2
0.3
auxotrophy
YNB Glucose
-0.0
0.2
0.1
growth on oleic acid
YNB Glucose
0.1
-0.1
0.4
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.4
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.7
0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.7
0.2
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
1.0
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.9
0.2
-0.0
growth on ricinoleic acid
YNB Glucose
0.3
0.8
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.7
1.2
-0.1
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