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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_252: 8620 - Hypothetical Protein, at 609608 to 610870
8620
mRNA_253: 8621 - KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins, at 611030 to 612229
8621
mRNA_254: 8622 - KOG0970 DNA polymerase alpha, catalytic subunit, at 612522 to 613328
8622
mRNA_255: 8623 - K02320 POLA1 DNA polymerase alpha subunit A, at 613626 to 618274
8623
mRNA_256: 8624 - K11254 H4 histone H4, at 618548 to 619064
8624
Group
Condition
mRNA_252
mRNA_253
mRNA_254
mRNA_255
mRNA_256
8620
8621
8622
8623
8624
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
0.5
-1.7
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.3
-1.1
auxotrophy
YNB Glucose
-0.1
-0.6
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.6
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.4
-0.4
growth on oleic acid
YNB Oleic Acid
0.1
-0.1
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.3
-0.7
auxotrophy
Dropout Complete
0.2
-0.6
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
-0.2
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.4
0.3
growth on oleic acid
YNB Glucose
-0.3
0.0
0.1
growth on ypd
YPD
-0.2
0.2
0.2
growth on ricinoleic acid
YNB Glucose
0.0
0.1
0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.0
0.7
ypd buoyancy
40 hrs Median Buoyancy
-0.2
0.4
0.4
ypd buoyancy
40 hrs High Buoyancy
-0.0
0.0
0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.0
0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.4
-0.5
0.9
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
0.1
0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.4
-0.1
0.9
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