Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_252: 8620 - Hypothetical Protein, at 609608 to 610870 8620 mRNA_253: 8621 - KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins, at 611030 to 612229 8621 mRNA_254: 8622 - KOG0970 DNA polymerase alpha, catalytic subunit, at 612522 to 613328 8622 mRNA_255: 8623 - K02320 POLA1 DNA polymerase alpha subunit A, at 613626 to 618274 8623 mRNA_256: 8624 - K11254 H4 histone H4, at 618548 to 619064 8624
Group Condition mRNA_252 mRNA_253 mRNA_254 mRNA_255 mRNA_256
8620
8621
8622
8623
8624
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.5     -1.7
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.3     -1.1
auxotrophy YNB Glucose -0.1 -0.6     -0.0
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.6     0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 -0.4     -0.4
growth on oleic acid YNB Oleic Acid 0.1 -0.1     -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2     -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.3     -0.7
auxotrophy Dropout Complete 0.2 -0.6     0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 -0.2     -0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.4     0.3
growth on oleic acid YNB Glucose -0.3 0.0     0.1
growth on ypd YPD -0.2 0.2     0.2
growth on ricinoleic acid YNB Glucose 0.0 0.1     0.3
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.0     0.7
ypd buoyancy 40 hrs Median Buoyancy -0.2 0.4     0.4
ypd buoyancy 40 hrs High Buoyancy -0.0 0.0     0.7
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.0     0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 -0.5     0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 0.1     0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 -0.1     0.9
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