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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_247: 8615 - K11254 H4 histone H4, at 602212 to 602729
8615
mRNA_248: 8616 - K01796 E5.1.99.4, AMACR, mcr alpha-methylacyl-CoA racemase, at 603396 to 605038
8616
mRNA_249: 8617 - K03538 POP4, RPP29 ribonuclease P protein subunit POP4, at 605214 to 606480
8617
mRNA_250: 8618 - K19245 JLP1 sulfonate dioxygenase, at 607313 to 608781
8618
mRNA_251: 8619 - HMMPfam-ACT domain-PF13840,PIRSF--PIRSF008459,SUPERFAMILY--SSF55021, at 608918 to 609439
8619
Group
Condition
mRNA_247
mRNA_248
mRNA_249
mRNA_250
mRNA_251
8615
8616
8617
8618
8619
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.7
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.7
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.0
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.5
-0.8
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.0
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.4
0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.1
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
0.2
-0.6
auxotrophy
YNB Glucose 75mM Arginine
0.0
-0.0
-0.1
auxotrophy
Dropout Complete
-0.1
0.2
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.1
0.2
growth on oleic acid
YNB Glucose
0.0
-0.3
0.3
auxotrophy
YNB Glucose
-0.0
0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.1
0.2
growth on oleic acid
YNB Oleic Acid
0.1
-0.4
0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.1
0.4
growth on ricinoleic acid
YNB Glucose
0.0
0.2
0.2
growth on ypd
YPD
-0.0
-0.1
0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.2
0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.2
0.7
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