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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_236: 8604 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047, at 580930 to 582126
8604
mRNA_237: 8605 - K08098 PIGZ, SMP3 phosphatidylinositol glycan, class Z, at 582180 to 584217
8605
mRNA_238: 8606 - Hypothetical Protein, at 585239 to 585472
8606
mRNA_239: 8607 - K01809 manA, MPI mannose-6-phosphate isomerase, at 585824 to 587660
8607
mRNA_240: 8608 - KOG0254 Predicted transporter (major facilitator superfamily), at 588518 to 590085
8608
Group
Condition
mRNA_236
mRNA_237
mRNA_238
mRNA_239
mRNA_240
8604
8605
8606
8607
8608
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-1.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
-1.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.8
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
growth on oleic acid
YNB Glucose
0.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.2
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.0
0.3
ypd buoyancy
40 hrs Low Buoyancy
0.3
0.1
growth on ypd
YPD
0.9
-0.6
auxotrophy
Dropout Complete
0.1
0.2
growth on ricinoleic acid
YNB Glucose
-0.1
0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
0.7
auxotrophy
YNB Glucose 75mM Arginine
0.3
0.2
auxotrophy
YNB Glucose
0.0
0.6
growth on oleic acid
YNB Oleic Acid
0.1
0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
1.1
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