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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_235: 8603 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 578724 to 580674
8603
mRNA_236: 8604 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047, at 580930 to 582126
8604
mRNA_237: 8605 - K08098 PIGZ, SMP3 phosphatidylinositol glycan, class Z, at 582180 to 584217
8605
mRNA_238: 8606 - Hypothetical Protein, at 585239 to 585472
8606
mRNA_239: 8607 - K01809 manA, MPI mannose-6-phosphate isomerase, at 585824 to 587660
8607
Group
Condition
mRNA_235
mRNA_236
mRNA_237
mRNA_238
mRNA_239
8603
8604
8605
8606
8607
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
auxotrophy
YNB Glucose
-0.2
0.0
growth on ricinoleic acid
YNB Glucose
0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.0
growth on oleic acid
YNB Glucose
0.1
0.0
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.0
growth on ypd
YPD
-0.7
0.9
auxotrophy
Dropout Complete
0.1
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.5
-0.1
growth on oleic acid
YNB Oleic Acid
0.3
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.6
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.5
0.1
ypd buoyancy
40 hrs High Buoyancy
0.7
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.9
0.3
ypd buoyancy
40 hrs No Buoyancy Separation
1.2
0.0
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