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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Number of genes on each side:
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_233: 8601 - K06287 maf septum formation protein, at 575956 to 577138
8601
mRNA_234: 8602 - K00452 HAAO 3-hydroxyanthranilate 3,4-dioxygenase, at 577218 to 578179
8602
mRNA_235: 8603 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 578724 to 580674
8603
mRNA_236: 8604 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047, at 580930 to 582126
8604
mRNA_237: 8605 - K08098 PIGZ, SMP3 phosphatidylinositol glycan, class Z, at 582180 to 584217
8605
Group
Condition
mRNA_233
mRNA_234
mRNA_235
mRNA_236
mRNA_237
8601
8602
8603
8604
8605
ypd buoyancy
40 hrs No Buoyancy Separation
-2.8
-1.3
1.2
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-2.3
0.1
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-1.3
-0.0
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-1.1
0.1
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-1.6
-0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
-1.1
0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.3
-0.5
-0.2
growth on ricinoleic acid
YNB Glucose
-0.9
-0.1
0.1
-0.1
auxotrophy
YNB Glucose
-0.3
-0.5
-0.2
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-1.0
0.6
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.7
-0.5
-0.0
0.3
auxotrophy
Dropout Complete
0.3
-1.2
0.1
0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.5
0.2
0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.8
-0.1
0.5
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.3
0.5
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.4
-0.4
0.7
0.1
growth on oleic acid
YNB Oleic Acid
0.2
-0.6
0.3
0.1
growth on oleic acid
YNB Glucose
0.1
0.0
0.1
0.0
growth on ypd
YPD
0.2
0.2
-0.7
0.9
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.2
0.9
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.8
-0.3
0.3
0.2
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