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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_228: 8596 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 563158 to 565625
8596
mRNA_229: 8597 - Hypothetical Protein, at 565794 to 566303
8597
mRNA_230: 8598 - K11254 H4 histone H4, at 566655 to 568496
8598
mRNA_231: 8599 - HMMPfam-Urb2/Npa2 family-PF10441,SUPERFAMILY--SSF48371, at 569811 to 575068
8599
mRNA_232: 8600 - KOG1773 Stress responsive protein, at 575328 to 575800
8600
Group
Condition
mRNA_228
mRNA_229
mRNA_230
mRNA_231
mRNA_232
8596
8597
8598
8599
8600
growth on ricinoleic acid
YNB Glucose
-0.2
-1.7
-0.0
auxotrophy
Dropout Complete
-0.1
-0.6
0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.4
-0.0
auxotrophy
YNB Glucose
-0.1
-0.6
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.3
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.4
-0.0
growth on ypd
YPD
-0.3
0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.3
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.3
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.3
0.1
ypd buoyancy
40 hrs High Buoyancy
0.3
-0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.3
-0.3
growth on oleic acid
YNB Oleic Acid
-0.1
0.3
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.4
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.9
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
0.5
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.4
0.5
-0.0
growth on oleic acid
YNB Glucose
0.0
1.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
1.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
1.5
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
1.5
-0.1
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