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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_225: 8593 - KOG0619 FOG Leucine rich repeat, at 556962 to 559070
8593
mRNA_226: 8594 - KOG2861 Uncharacterized conserved protein, at 559154 to 560792
8594
mRNA_227: 8595 - K03259 EIF4E translation initiation factor 4E, at 561039 to 562506
8595
mRNA_228: 8596 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 563158 to 565625
8596
mRNA_229: 8597 - Hypothetical Protein, at 565794 to 566303
8597
Group
Condition
mRNA_225
mRNA_226
mRNA_227
mRNA_228
mRNA_229
8593
8594
8595
8596
8597
growth on ricinoleic acid
YNB Glucose
-0.3
0.5
0.2
-0.2
-1.7
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
-0.0
-0.5
0.1
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.2
-1.2
-0.2
0.9
growth on ypd
YPD
0.2
-0.1
-0.4
-0.3
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.1
0.2
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.2
0.2
0.3
-0.1
-0.4
ypd buoyancy
40 hrs Low Buoyancy
0.3
0.1
-0.4
0.1
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.2
-0.0
0.2
-0.3
auxotrophy
Dropout Complete
-0.3
0.6
0.3
-0.1
-0.6
auxotrophy
YNB Glucose
-0.1
0.3
0.5
-0.1
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
0.3
-0.6
0.4
0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
0.6
0.7
-0.1
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
0.2
1.1
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
-0.1
0.2
-0.1
1.5
ypd buoyancy
40 hrs No Buoyancy Separation
0.7
0.3
-0.4
-0.1
0.5
ypd buoyancy
40 hrs High Buoyancy
0.5
0.3
0.3
0.3
-0.2
growth on oleic acid
YNB Glucose
-0.1
0.0
0.1
0.0
1.1
growth on oleic acid
YNB Oleic Acid
-0.3
0.0
1.3
-0.1
0.3
ypd buoyancy
40 hrs Median Buoyancy
0.6
-0.1
0.4
0.0
0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.3
0.6
0.0
1.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-0.1
0.9
0.0
1.5
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