Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_224: 8592 - K07300 chaA, CAX Ca2+-H+ antiporter, at 554235 to 556538 8592 mRNA_225: 8593 - KOG0619 FOG Leucine rich repeat, at 556962 to 559070 8593 mRNA_226: 8594 - KOG2861 Uncharacterized conserved protein, at 559154 to 560792 8594 mRNA_227: 8595 - K03259 EIF4E translation initiation factor 4E, at 561039 to 562506 8595 mRNA_228: 8596 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 563158 to 565625 8596
Group Condition mRNA_224 mRNA_225 mRNA_226 mRNA_227 mRNA_228
8592
8593
8594
8595
8596
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.3 -0.2 -1.2 -0.2
auxotrophy YNB Glucose 75mM Arginine -1.8 -0.2 0.1 0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.7 -0.1 0.2 -0.1
growth on ricinoleic acid YNB Glucose -1.2 -0.3 0.5 0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -1.3 0.7 0.3 -0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -1.3 -0.5 0.6 0.7 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.8 0.3 0.1 -0.4 0.1
auxotrophy YNB Glucose 75mM Methionine -0.7 -0.2 0.2 0.3 -0.1
auxotrophy Dropout Complete -0.9 -0.3 0.6 0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.2 -0.3 0.6 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.5 -0.1 0.9 0.0
growth on ypd YPD 0.6 0.2 -0.1 -0.4 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -1.2 0.0 0.2 1.1 -0.1
auxotrophy YNB Glucose -0.7 -0.1 0.3 0.5 -0.1
growth on oleic acid YNB Glucose 0.2 -0.1 0.0 0.1 0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.6 -0.1 0.4 0.0
growth on oleic acid YNB Oleic Acid -0.1 -0.3 0.0 1.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 2.3 -0.9 -0.0 -0.5 0.1
ypd buoyancy 40 hrs High Buoyancy 0.3 0.5 0.3 0.3 0.3
facs on lipid accumulation Sorted No BODIPY Gate 2.4 -0.5 0.3 -0.6 0.4
facs on lipid accumulation Sorted High BODIPY Gate 3.4 -0.2 0.2 -0.0 0.2
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