Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_221: 8589 - HMMPfam-Squalene/phytoene synthase-PF00494,ProSitePatterns-Squalene and phytoene synthases signature 2.-PS01045,SUPERFAMILY--SSF48576,TIGRFAM-CarR_dom_SF lycopene cyclase domain-TIGR03462, at 545315 to 547571 8589 mRNA_222: 8590 - K12795 SUGT1, SGT1 suppressor of G2 allele of SKP1, at 547787 to 548767 8590 mRNA_223: 8591 - HMMPfam-Protein of unknown function (DUF1212)-PF06738,HMMPfam-Protein of unknown function (DUF3815)-PF12821, at 548978 to 553115 8591 mRNA_224: 8592 - K07300 chaA, CAX Ca2+-H+ antiporter, at 554235 to 556538 8592 mRNA_225: 8593 - KOG0619 FOG Leucine rich repeat, at 556962 to 559070 8593
Group Condition mRNA_221 mRNA_222 mRNA_223 mRNA_224 mRNA_225
8589
8590
8591
8592
8593
auxotrophy YNB Glucose 75mM Arginine -0.1   -0.3 -1.8 -0.2
growth on ricinoleic acid YNB Glucose -0.5   -0.0 -1.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1   0.3 -1.3 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.1   -0.2 -1.2 0.0
auxotrophy Dropout Complete -0.2   -0.2 -0.9 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.3   -0.2 -0.7 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2   0.0 -0.3 -0.7
auxotrophy YNB Glucose -0.1   -0.1 -0.7 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2   -0.0 -0.4 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1   -0.1 -0.4 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1   -0.2 -0.2 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.3   0.3 -1.3 0.7
ypd buoyancy 40 hrs Low Buoyancy 0.0   -0.1 -0.8 0.3
growth on oleic acid YNB Glucose -0.0   -0.1 0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.2   -0.1 2.3 -0.9
growth on oleic acid YNB Oleic Acid 0.2   0.4 -0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.2   -0.0 -0.1 0.6
ypd buoyancy 40 hrs High Buoyancy -0.0   0.1 0.3 0.5
growth on ypd YPD 0.1   0.5 0.6 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1   0.0 2.4 -0.5
facs on lipid accumulation Sorted High BODIPY Gate 1.1   0.3 3.4 -0.2
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