Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_218: 8586 - Hypothetical Protein, at 540999 to 541232 8586 mRNA_219: 8587 - Hypothetical Protein, at 541631 to 542423 8587 mRNA_220: 8588 - K11159 K11159 carotenoid cleavage dioxygenase, at 542754 to 544832 8588 mRNA_221: 8589 - HMMPfam-Squalene/phytoene synthase-PF00494,ProSitePatterns-Squalene and phytoene synthases signature 2.-PS01045,SUPERFAMILY--SSF48576,TIGRFAM-CarR_dom_SF lycopene cyclase domain-TIGR03462, at 545315 to 547571 8589 mRNA_222: 8590 - K12795 SUGT1, SGT1 suppressor of G2 allele of SKP1, at 547787 to 548767 8590
Group Condition mRNA_218 mRNA_219 mRNA_220 mRNA_221 mRNA_222
8586
8587
8588
8589
8590
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.4 -0.2 -1.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -1.3 -0.4 -0.2  
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.5 -0.3 -0.3  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -1.1 -0.0 -0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 -1.1 -0.1 0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -1.0 0.1 0.1  
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.5 -0.1 -0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.2 -0.2 -0.1  
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.3 0.0 -0.3  
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.4 -0.0 0.0  
growth on oleic acid YNB Glucose -0.2 -0.0 0.0 -0.0  
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 0.1 -0.0  
growth on ricinoleic acid YNB Glucose 0.1 0.3 -0.0 -0.5  
growth on oleic acid YNB Oleic Acid -0.1 -0.2 0.2 0.2  
auxotrophy YNB Glucose 75mM Arginine -0.1 0.2 0.3 -0.1  
auxotrophy YNB Glucose 0.2 -0.0 0.2 -0.1  
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.3 -0.0 -0.1  
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.1 0.1 0.2  
auxotrophy Dropout Complete 0.1 0.5 0.3 -0.2  
growth on ypd YPD 0.4 0.7 -0.3 0.1  
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.1 0.1 1.1  
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