Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_192: 8560 - HMMPfam-SUR7/PalI family-PF06687, at 467837 to 468649 8560 mRNA_193: 8561 - K14573 NOP4, RBM28 nucleolar protein 4, at 469004 to 472832 8561 mRNA_194: 8562 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 473851 to 475704 8562 mRNA_195: 8563 - K14570 REX1, REXO1, RNH70 RNA exonuclease 1, at 475882 to 478455 8563 mRNA_196: 8564 - K11230 SSK2 mitogen-activated protein kinase kinase kinase, at 478616 to 483273 8564
Group Condition mRNA_192 mRNA_193 mRNA_194 mRNA_195 mRNA_196
8560
8561
8562
8563
8564
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2   -0.4    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2   -0.7    
facs on lipid accumulation Sorted High BODIPY Gate 0.0   -0.5    
ypd buoyancy 40 hrs No Buoyancy Separation -0.1   -0.2    
ypd buoyancy 40 hrs High Buoyancy 0.0   -0.3    
growth on oleic acid YNB Glucose -0.1   -0.0    
ypd buoyancy 40 hrs Low Buoyancy -0.2   0.0    
ypd buoyancy 40 hrs Median Buoyancy -0.2   0.1    
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1   -0.2    
facs on lipid accumulation Sorted No BODIPY Gate 0.1   -0.2    
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3   -0.4    
growth on ypd YPD 0.2   -0.3    
growth on ricinoleic acid YNB Ricinoleic Acid 0.1   -0.1    
growth on oleic acid YNB Oleic Acid 0.2   -0.2    
facs on lipid accumulation Sorted Low BODIPY Gate 0.1   0.0    
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0   0.2    
growth on ricinoleic acid YNB Glucose 0.3   0.1    
auxotrophy YNB Glucose 75mM Methionine 0.8   0.0    
auxotrophy Dropout Complete 0.6   0.4    
auxotrophy YNB Glucose 75mM Arginine 1.1   0.0    
auxotrophy YNB Glucose 0.8   0.4    
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