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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_177: 8545 - KOG4096 Uncharacterized conserved protein, at 434117 to 434779
8545
mRNA_178: 8546 - K00974 cca tRNA nucleotidyltransferase (CCA-adding enzyme), at 435163 to 437748
8546
mRNA_179: 8547 - KOG2886 Uncharacterized conserved protein, at 437893 to 438740
8547
mRNA_180: 8548 - K01647 CS, gltA citrate synthase, at 438943 to 441127
8548
mRNA_181: 8549 - K12870 ISY1 pre-mRNA-splicing factor ISY1, at 441723 to 442875
8549
Group
Condition
mRNA_177
mRNA_178
mRNA_179
mRNA_180
mRNA_181
8545
8546
8547
8548
8549
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.9
-0.1
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
0.1
-0.8
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
0.0
-0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.6
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
-0.1
-0.5
growth on ricinoleic acid
YNB Glucose
-0.4
-0.3
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
0.0
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.2
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.1
-0.4
growth on oleic acid
YNB Glucose
-0.1
0.1
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
0.1
0.1
ypd buoyancy
40 hrs High Buoyancy
0.0
-0.4
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.3
0.1
growth on oleic acid
YNB Oleic Acid
0.0
0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
0.0
0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
1.5
-0.1
-0.6
auxotrophy
YNB Glucose 75mM Arginine
1.3
-0.0
-0.3
auxotrophy
Dropout Complete
1.5
-0.1
-0.3
auxotrophy
YNB Glucose
1.4
0.2
-0.3
growth on ypd
YPD
0.6
1.3
-0.2
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