Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_173: 8541 - ProSiteProfiles-F-box domain profile.-PS50181, at 423243 to 425969 8541 mRNA_174: 8542 - HMMPfam-Glyoxal oxidase N-terminus-PF07250,HMMPfam-Domain of unknown function (DUF1929)-PF09118,SUPERFAMILY--SSF50965,SUPERFAMILY--SSF81296, at 426426 to 428792 8542 mRNA_175: 8543 - KOG2533 Permease of the major facilitator superfamily, at 429470 to 431854 8543 mRNA_176: 8544 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 432530 to 433945 8544 mRNA_177: 8545 - KOG4096 Uncharacterized conserved protein, at 434117 to 434779 8545
Group Condition mRNA_173 mRNA_174 mRNA_175 mRNA_176 mRNA_177
8541
8542
8543
8544
8545
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.2 -0.3 -0.5 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.2 -0.1 -0.9 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.4 -0.1 0.2 -0.6
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.7 -0.5 0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.4 -0.2 -0.1 -0.7 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -0.0 -0.5 0.1 -0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.1 -0.2 -0.2 0.1
growth on oleic acid YNB Glucose 0.1 0.1 -0.2 -0.3 -0.1
growth on oleic acid YNB Oleic Acid 0.2 -0.3 -0.3 -0.0 0.0
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.3 -0.2 0.0 0.0
growth on ricinoleic acid YNB Glucose 0.1 0.2 -0.1 -0.2 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.1 -0.1 -0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.4 0.1 0.0 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.0 -0.4 0.4 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.2 -0.0 0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.1 -0.0 0.0 0.0
growth on ypd YPD 0.5 -0.5 0.6 0.3 0.6
auxotrophy YNB Glucose 75mM Arginine 0.4 -0.1 -0.2 0.4 1.3
auxotrophy Dropout Complete 0.4 0.1 -0.2 0.3 1.5
auxotrophy YNB Glucose 75mM Methionine 0.6 0.3 -0.3 0.3 1.5
auxotrophy YNB Glucose 0.4 0.4 -0.1 0.6 1.4
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