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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_173: 8541 - ProSiteProfiles-F-box domain profile.-PS50181, at 423243 to 425969
8541
mRNA_174: 8542 - HMMPfam-Glyoxal oxidase N-terminus-PF07250,HMMPfam-Domain of unknown function (DUF1929)-PF09118,SUPERFAMILY--SSF50965,SUPERFAMILY--SSF81296, at 426426 to 428792
8542
mRNA_175: 8543 - KOG2533 Permease of the major facilitator superfamily, at 429470 to 431854
8543
mRNA_176: 8544 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 432530 to 433945
8544
mRNA_177: 8545 - KOG4096 Uncharacterized conserved protein, at 434117 to 434779
8545
Group
Condition
mRNA_173
mRNA_174
mRNA_175
mRNA_176
mRNA_177
8541
8542
8543
8544
8545
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.2
-0.3
-0.5
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
0.2
-0.1
-0.9
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.4
-0.1
0.2
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.7
-0.5
0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
-0.2
-0.1
-0.7
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
-0.0
-0.5
0.1
-0.9
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.1
-0.2
-0.2
0.1
growth on oleic acid
YNB Glucose
0.1
0.1
-0.2
-0.3
-0.1
growth on oleic acid
YNB Oleic Acid
0.2
-0.3
-0.3
-0.0
0.0
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.3
-0.2
0.0
0.0
growth on ricinoleic acid
YNB Glucose
0.1
0.2
-0.1
-0.2
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.1
-0.1
-0.3
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.4
0.1
0.0
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.0
-0.4
0.4
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.2
-0.0
0.0
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.0
-0.1
-0.0
0.0
0.0
growth on ypd
YPD
0.5
-0.5
0.6
0.3
0.6
auxotrophy
YNB Glucose 75mM Arginine
0.4
-0.1
-0.2
0.4
1.3
auxotrophy
Dropout Complete
0.4
0.1
-0.2
0.3
1.5
auxotrophy
YNB Glucose 75mM Methionine
0.6
0.3
-0.3
0.3
1.5
auxotrophy
YNB Glucose
0.4
0.4
-0.1
0.6
1.4
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