Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_148: 8516 - KOG0254 Predicted transporter (major facilitator superfamily), at 372141 to 374463 8516 mRNA_149: 8517 - Hypothetical Protein, at 374872 to 375333 8517 mRNA_150: 8518 - HMMPfam-Beta-glucan synthesis-associated protein (SKN1)-PF03935,SUPERFAMILY--SSF49899, at 375753 to 378108 8518 mRNA_151: 8519 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 379065 to 379994 8519 mRNA_152: 8520 - BLAST Midasin [Pteropus alecto], at 380241 to 381290 8520
Group Condition mRNA_148 mRNA_149 mRNA_150 mRNA_151 mRNA_152
8516
8517
8518
8519
8520
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 -0.4 -0.1 -1.4 -0.0
growth on ypd YPD -0.2 -0.2 -0.1 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.0 -0.3 0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 -0.2 0.0 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 0.4 -0.2 -0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.0 -0.1 -0.6 0.0
auxotrophy Dropout Complete 0.1 0.3 -0.5 -0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.3 0.3 -0.5 -0.3 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 0.3 -0.4 -0.0 0.0
growth on oleic acid YNB Oleic Acid 0.0 -0.2 -0.0 0.0 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 0.1 -0.4 0.3 0.1
auxotrophy YNB Glucose 75mM Arginine 0.3 0.4 -0.5 -0.0 -0.1
growth on oleic acid YNB Glucose 0.1 0.1 -0.3 0.2 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.5 -0.1 0.1 0.3
ypd buoyancy 40 hrs Median Buoyancy 0.4 0.3 -0.1 -0.2 0.1
auxotrophy YNB Glucose 75mM Methionine 0.2 0.2 -0.0 -0.0 0.0
growth on ricinoleic acid YNB Glucose -0.2 0.1 -0.1 0.3 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.4 0.0 -0.2 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.2 -0.2 0.6 0.2
auxotrophy YNB Glucose 0.5 0.4 -0.1 0.1 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 0.9 0.1 0.7 0.3
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