Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_139: 8507 - K14538 NUG1, GNL3 nuclear GTP-binding protein, at 333941 to 336511 8507 mRNA_140: 8508 - K14571 RIX7, NVL ribosome biogenesis ATPase, at 336645 to 339470 8508 mRNA_141: 8509 - Hypothetical Protein, at 339978 to 342089 8509 mRNA_142: 8510 - HMMPfam-Protein of unknown function (DUF3712)-PF12505, at 343005 to 355699 8510 mRNA_143: 8511 - KOG4136 Predicted mitochondrial cholesterol transporter, at 356168 to 357922 8511
Group Condition mRNA_139 mRNA_140 mRNA_141 mRNA_142 mRNA_143
8507
8508
8509
8510
8511
growth on ypd YPD     -0.7 0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy     -0.0 -0.0 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation     0.0 -0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy     -0.3 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate     -0.4 -0.0 0.2
facs on lipid accumulation Sorted Low BODIPY Gate     -0.5 -0.0 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     -0.4 -0.1 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy     -0.3 0.1 0.1
growth on oleic acid YNB Glucose     -0.2 -0.0 0.1
ypd buoyancy 40 hrs Low Buoyancy     -0.2 -0.0 0.2
auxotrophy YNB Glucose 75mM Methionine     0.2 -0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine     0.2 -0.0 -0.0
auxotrophy YNB Glucose     0.2 0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate     -0.1 -0.1 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy     0.2 -0.1 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid     -0.1 0.3 0.0
growth on ricinoleic acid YNB Ricinoleic Acid     -0.1 0.1 0.4
auxotrophy Dropout Complete     0.4 -0.0 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy     -0.2 0.0 0.6
growth on oleic acid YNB Oleic Acid     0.1 0.1 0.2
growth on ricinoleic acid YNB Glucose     0.4 0.0 -0.0
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