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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_130: 8498 - BLAST 60S ribosomal protein L18-B [Termitomyces sp. J132], at 315301 to 316369
8498
mRNA_131: 8499 - K11092 SNRPA1 U2 small nuclear ribonucleoprotein A', at 316556 to 317725
8499
mRNA_132: 8500 - K16944 SEPT7, CDC3 septin 7, at 318013 to 320034
8500
mRNA_133: 8501 - Hypothetical Protein, at 320453 to 321837
8501
mRNA_134: 8502 - Hypothetical Protein, at 322161 to 322511
8502
Group
Condition
mRNA_130
mRNA_131
mRNA_132
mRNA_133
mRNA_134
8498
8499
8500
8501
8502
ypd buoyancy
40 hrs No Buoyancy Separation
-1.7
-1.8
-0.3
-2.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.3
-0.2
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.3
-0.4
-0.0
0.5
growth on oleic acid
YNB Glucose
-0.6
-0.1
-0.1
-0.1
growth on oleic acid
YNB Oleic Acid
-1.0
0.0
-0.1
0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.6
0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.1
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-1.6
0.6
0.2
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.1
-0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.5
0.4
0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.1
-0.0
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.5
-0.2
0.0
0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.1
-0.2
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.7
-0.6
0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
-0.3
-0.2
0.4
auxotrophy
YNB Glucose
-0.2
0.1
0.2
0.2
auxotrophy
Dropout Complete
-0.1
0.2
0.2
0.2
growth on ricinoleic acid
YNB Glucose
0.5
0.1
-0.0
0.4
growth on ypd
YPD
1.0
-0.3
0.0
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
0.7
0.3
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.8
1.0
0.6
0.5
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