Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_124: 8492 - HMMPfam-Trehalose utilisation-PF06283,SUPERFAMILY--SSF52317, at 298374 to 299465 8492 mRNA_125: 8493 - HMMPfam-Alpha/beta hydrolase family-PF12695,SUPERFAMILY--SSF53474, at 299830 to 300571 8493 mRNA_126: 8494 - Hypothetical Protein, at 300775 to 301342 8494 mRNA_127: 8495 - K11229 BCK1 mitogen-activated protein kinase kinase kinase, at 304252 to 307207 8495 mRNA_128: 8496 - K11592 DICER1, DCR1 endoribonuclease Dicer, at 307596 to 312359 8496
Group Condition mRNA_124 mRNA_125 mRNA_126 mRNA_127 mRNA_128
8492
8493
8494
8495
8496
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -5.0 -0.1 -0.2 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -1.0 -0.6 -0.2 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.4 -0.8 0.0 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.6 -0.3 0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.7 -0.0 -0.2 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.7 0.1 -0.2 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.4 -0.2 0.1 0.0
growth on ricinoleic acid YNB Glucose 0.3 -1.1 0.2 0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.7 0.1 -0.0 0.1
growth on oleic acid YNB Oleic Acid -0.3 -0.3 -0.0 0.3 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 0.1 0.0 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.3 -0.4 -0.1 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.2 -0.5 0.2 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.0 -0.2 0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.2 0.0 0.1 -0.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 0.2 -0.0 0.3 -0.1
auxotrophy Dropout Complete 0.3 -0.1 0.1 0.4 0.1
auxotrophy YNB Glucose 75mM Arginine 0.2 0.2 0.3 -0.0 -0.0
growth on oleic acid YNB Glucose -0.3 0.7 0.3 -0.0 0.1
auxotrophy YNB Glucose 0.4 0.1 0.2 0.2 0.1
growth on ypd YPD 0.2 1.6 0.6 -0.3 0.1
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