Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_112: 8480 - K10899 RECQL ATP-dependent DNA helicase Q1, at 264157 to 266973 8480 mRNA_113: 8481 - KOG0209 P-type ATPase, at 267088 to 267405 8481 mRNA_114: 8482 - K10862 TDP1 tyrosyl-DNA phosphodiesterase 1, at 267754 to 270066 8482 mRNA_115: 8483 - K14950 ATP13A1 cation-transporting ATPase 13A1, at 270395 to 274744 8483 mRNA_116: 8484 - K06072 DOHH deoxyhypusine monooxygenase, at 275050 to 276428 8484
Group Condition mRNA_112 mRNA_113 mRNA_114 mRNA_115 mRNA_116
8480
8481
8482
8483
8484
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.3 -0.2    
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.7 0.3    
growth on ypd YPD -0.2 -0.4 0.1    
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.3 -0.2    
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 0.1 -0.2    
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.4 0.3    
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.1 -0.3    
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 0.2 0.1    
growth on oleic acid YNB Glucose -0.1 0.0 0.1    
auxotrophy YNB Glucose -0.1 0.2 0.1    
growth on ricinoleic acid YNB Glucose -0.0 0.1 0.0    
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.1 0.1    
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.0 0.3    
auxotrophy YNB Glucose 75mM Methionine -0.3 0.6 0.0    
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 -0.0 0.1    
growth on oleic acid YNB Oleic Acid -0.1 0.4 0.2    
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.4 -0.1    
auxotrophy YNB Glucose 75mM Arginine -0.3 0.7 0.1    
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.7 0.1    
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 1.0 -0.1    
auxotrophy Dropout Complete -0.1 1.0 0.2    
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