Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_111: 8479 - KOG0254 Predicted transporter (major facilitator superfamily), at 260930 to 263760 8479 mRNA_112: 8480 - K10899 RECQL ATP-dependent DNA helicase Q1, at 264157 to 266973 8480 mRNA_113: 8481 - KOG0209 P-type ATPase, at 267088 to 267405 8481 mRNA_114: 8482 - K10862 TDP1 tyrosyl-DNA phosphodiesterase 1, at 267754 to 270066 8482 mRNA_115: 8483 - K14950 ATP13A1 cation-transporting ATPase 13A1, at 270395 to 274744 8483
Group Condition mRNA_111 mRNA_112 mRNA_113 mRNA_114 mRNA_115
8479
8480
8481
8482
8483
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 0.1 0.1 0.1  
facs on lipid accumulation Sorted High BODIPY Gate -0.0 0.3 -0.1 -0.3  
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.0 -0.4 0.3  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.6 -0.1 -0.3 -0.2  
growth on ypd YPD 0.6 -0.2 -0.4 0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6 0.1 -0.3 -0.2  
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 0.0 0.3  
growth on oleic acid YNB Glucose 0.2 -0.1 0.0 0.1  
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 0.6 0.0  
ypd buoyancy 40 hrs High Buoyancy 0.9 -0.1 -0.7 0.3  
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.3 0.7 0.1  
auxotrophy YNB Glucose 0.3 -0.1 0.2 0.1  
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.4 -0.0 0.1  
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 -0.3 0.2 0.1  
facs on lipid accumulation Sorted No BODIPY Gate -0.0 0.3 0.4 -0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.7 0.0 0.1 -0.2  
growth on ricinoleic acid YNB Glucose 0.6 -0.0 0.1 0.0  
growth on oleic acid YNB Oleic Acid 0.2 -0.1 0.4 0.2  
auxotrophy Dropout Complete -0.3 -0.1 1.0 0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.0 1.0 -0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 0.1 0.7 0.1  
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