Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_97: 8465 - KOG2234 Predicted UDP-galactose transporter, at 229785 to 233167 8465 mRNA_98: 8466 - Hypothetical Protein, at 233874 to 234659 8466 mRNA_99: 8467 - HMMPfam-Fungal cellulose binding domain-PF00734,HMMPfam-GlcNAc-PI de-N-acetylase-PF02585,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-Coagulation factors 5/8 type C domain (FA58C) profile.-PS50022,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF102588,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF57180, at 235594 to 240654 8467 mRNA_100: 8468 - K03686 dnaJ molecular chaperone DnaJ, at 241337 to 243142 8468 mRNA_101: 8469 - K18719 NUP82 nucleoporin NUP82, at 243748 to 246867 8469
Group Condition mRNA_97 mRNA_98 mRNA_99 mRNA_100 mRNA_101
8465
8466
8467
8468
8469
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.3 -0.1    
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.3 -0.0    
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.3 -0.1    
growth on oleic acid YNB Glucose -0.3 0.2 -0.3    
growth on ricinoleic acid YNB Glucose -0.3 -0.1 0.1    
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.1 -0.2    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.1 -0.1    
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.4 -0.0    
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.1 -0.1    
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.3 0.0    
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.2 -0.1    
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.4 0.3    
auxotrophy YNB Glucose 75mM Arginine -0.2 0.1 0.0    
auxotrophy Dropout Complete -0.0 -0.0 -0.0    
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 0.2    
growth on oleic acid YNB Oleic Acid 0.1 0.0 -0.0    
auxotrophy YNB Glucose -0.2 0.1 0.2    
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 0.3 -0.1    
growth on ypd YPD -0.0 0.5 -0.2    
auxotrophy YNB Glucose 75mM Methionine -0.0 0.3 0.0    
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.3 0.2    
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