Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_92: 8460 - KOG2914 Predicted haloacid-halidohydrolase and related hydrolases, at 217373 to 218871 8460 mRNA_93: 8461 - ProSiteProfiles-BTB domain profile.-PS50097, at 219909 to 221427 8461 mRNA_94: 8462 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 221579 to 223787 8462 mRNA_95: 8463 - K14408 CSTF3, RNA14 cleavage stimulation factor subunit 3, at 224693 to 228325 8463 mRNA_96: 8464 - KOG4031 Vesicle coat protein clathrin, light chain, at 228445 to 229589 8464
Group Condition mRNA_92 mRNA_93 mRNA_94 mRNA_95 mRNA_96
8460
8461
8462
8463
8464
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.8 0.1    
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.5 -0.2    
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.2 -0.3    
auxotrophy Dropout Complete -0.0 -0.4 -0.2    
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.3 0.1    
auxotrophy YNB Glucose -0.1 -0.6 0.1    
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.3 -0.0    
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 0.4 -0.2    
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 0.0 -0.0    
auxotrophy YNB Glucose 75mM Methionine -0.4 0.1 -0.0    
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.2 -0.0    
growth on oleic acid YNB Oleic Acid -0.2 0.1 -0.1    
growth on ypd YPD -0.1 -0.1 0.3    
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.1 0.3    
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.4 0.7    
growth on oleic acid YNB Glucose 0.4 -0.2 0.1    
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -0.2 0.1    
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 0.2 0.2    
growth on ricinoleic acid YNB Glucose -0.4 0.3 0.4    
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 0.5 0.2    
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.7 0.5    
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