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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_89: 8457 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 213359 to 214966
8457
mRNA_90: 8458 - Hypothetical Protein, at 215330 to 215955
8458
mRNA_91: 8459 - HMMPfam-Domain of unknown function (DUF4604)-PF15377, at 216175 to 216894
8459
mRNA_92: 8460 - KOG2914 Predicted haloacid-halidohydrolase and related hydrolases, at 217373 to 218871
8460
mRNA_93: 8461 - ProSiteProfiles-BTB domain profile.-PS50097, at 219909 to 221427
8461
Group
Condition
mRNA_89
mRNA_90
mRNA_91
mRNA_92
mRNA_93
8457
8458
8459
8460
8461
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
0.4
-1.1
-0.4
-0.8
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.5
-0.2
-0.2
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.5
-0.7
-0.0
0.5
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.2
-0.2
-0.4
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-0.1
-0.6
-0.1
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.2
-0.3
-0.2
0.1
growth on ricinoleic acid
YNB Glucose
0.3
-0.3
-0.5
-0.4
0.3
growth on ypd
YPD
-0.3
-0.0
-0.1
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
0.0
-0.4
0.0
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.0
-0.0
-0.3
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.2
0.1
-0.0
-0.4
0.1
auxotrophy
Dropout Complete
-0.1
-0.1
0.3
-0.0
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.0
0.1
-0.3
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
-0.2
0.0
-0.2
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.1
0.3
-0.6
0.4
auxotrophy
YNB Glucose
-0.2
0.4
0.2
-0.1
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.2
-0.4
0.4
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.1
0.1
-0.0
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.0
-0.7
0.2
0.7
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
0.3
-0.5
-0.1
0.2
growth on oleic acid
YNB Glucose
0.3
0.2
-0.2
0.4
-0.2
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