Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_86: 8454 - K01452 E3.5.1.41 chitin deacetylase, at 204818 to 206685 8454 mRNA_87: 8455 - BLAST HAP1, N-terminal [Xanthophyllomyces dendrorhous], at 207025 to 210193 8455 mRNA_88: 8456 - K17361 ACOT9 acyl-coenzyme A thioesterase 9, at 210659 to 212272 8456 mRNA_89: 8457 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 213359 to 214966 8457 mRNA_90: 8458 - Hypothetical Protein, at 215330 to 215955 8458
Group Condition mRNA_86 mRNA_87 mRNA_88 mRNA_89 mRNA_90
8454
8455
8456
8457
8458
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.2 -0.8 0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.1 -0.4 -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 0.3 -0.1 -0.4 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.0 0.1 -0.3 -0.1 -0.5
auxotrophy Dropout Complete -0.5 0.2 -0.4 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 0.3 -0.2 -0.1 -0.1
growth on oleic acid YNB Oleic Acid -0.4 0.0 0.1 -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 -0.0 -0.2 -0.2
growth on ypd YPD -0.1 0.0 -0.0 -0.3 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.3 0.0 0.1 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.0 -0.7 -0.0 0.4
auxotrophy YNB Glucose -0.5 0.3 -0.3 -0.2 0.4
auxotrophy YNB Glucose 75mM Arginine -0.5 0.4 -0.2 -0.0 0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 0.3 -0.2 -0.2 0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.2 0.5 -0.0 -0.2
growth on ricinoleic acid YNB Glucose -0.2 0.1 0.1 0.3 -0.3
growth on oleic acid YNB Glucose -0.4 -0.0 -0.0 0.3 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.1 0.0 -0.2 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.1 -0.0 0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.4 0.1 -0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.7 0.5 0.3 0.3
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