Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_85: 8453 - BLAST glutamine synthetase [Sanghuangporus baumii], at 203010 to 204516 8453 mRNA_86: 8454 - K01452 E3.5.1.41 chitin deacetylase, at 204818 to 206685 8454 mRNA_87: 8455 - BLAST HAP1, N-terminal [Xanthophyllomyces dendrorhous], at 207025 to 210193 8455 mRNA_88: 8456 - K17361 ACOT9 acyl-coenzyme A thioesterase 9, at 210659 to 212272 8456 mRNA_89: 8457 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 213359 to 214966 8457
Group Condition mRNA_85 mRNA_86 mRNA_87 mRNA_88 mRNA_89
8453
8454
8455
8456
8457
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.4 -0.2 -0.8 0.1
auxotrophy Dropout Complete -0.4 -0.5 0.2 -0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.4 0.3 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.3 -0.1 -0.4 -0.2
auxotrophy YNB Glucose -0.2 -0.5 0.3 -0.3 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.5 0.4 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.0 0.0 -0.7 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 -0.7 0.3 -0.2 -0.1
growth on oleic acid YNB Glucose -0.2 -0.4 -0.0 -0.0 0.3
growth on oleic acid YNB Oleic Acid 0.0 -0.4 0.0 0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.2 -0.3 0.0 0.1
growth on ypd YPD 0.1 -0.1 0.0 -0.0 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.0 -0.1 -0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.2 0.3 -0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.0 0.1 -0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.1 0.1 0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.3 -0.2 0.5 -0.0
growth on ricinoleic acid YNB Glucose -0.1 -0.2 0.1 0.1 0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.1 0.4 0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.2 0.1 -0.0 0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.2 -0.7 0.5 0.3
remove
mRNA_85
plot		 remove
mRNA_86
plot		 remove
mRNA_87		 remove
mRNA_88
plot		 remove
mRNA_89
plot