Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_84: 8452 - K01522 FHIT bis(5'-adenosyl)-triphosphatase, at 201823 to 202716 8452 mRNA_85: 8453 - BLAST glutamine synthetase [Sanghuangporus baumii], at 203010 to 204516 8453 mRNA_86: 8454 - K01452 E3.5.1.41 chitin deacetylase, at 204818 to 206685 8454 mRNA_87: 8455 - BLAST HAP1, N-terminal [Xanthophyllomyces dendrorhous], at 207025 to 210193 8455 mRNA_88: 8456 - K17361 ACOT9 acyl-coenzyme A thioesterase 9, at 210659 to 212272 8456
Group Condition mRNA_84 mRNA_85 mRNA_86 mRNA_87 mRNA_88
8452
8453
8454
8455
8456
ypd buoyancy 40 hrs No Buoyancy Separation -2.7 0.1 0.2 -0.7 0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 0.1 -0.4 -0.2 -0.8
facs on lipid accumulation Sorted No BODIPY Gate -1.8 0.1 -0.1 0.1 0.0
growth on oleic acid YNB Oleic Acid -1.0 0.0 -0.4 0.0 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.2 0.1 -0.2 0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.0 -0.0 0.0 -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 0.1 -0.3 -0.1 -0.4
growth on oleic acid YNB Glucose -0.2 -0.2 -0.4 -0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.0 -0.0 -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.1 -0.2 -0.3 0.0
ypd buoyancy 40 hrs High Buoyancy -0.6 0.2 -0.3 -0.2 0.5
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.5 -0.4 0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3 0.2 -0.0 0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.0 -0.7 0.3 -0.2
growth on ypd YPD -0.2 0.1 -0.1 0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine 0.6 -0.4 -0.5 0.4 -0.2
auxotrophy Dropout Complete 0.9 -0.4 -0.5 0.2 -0.4
auxotrophy YNB Glucose 0.6 -0.2 -0.5 0.3 -0.3
auxotrophy YNB Glucose 75mM Methionine 0.5 -0.0 -0.2 0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.6 -0.0 -0.1 0.4 0.1
growth on ricinoleic acid YNB Glucose 1.1 -0.1 -0.2 0.1 0.1
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