Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_81: 8449 - K12176 COPS2, CSN2, TRIP15 COP9 signalosome complex subunit 2, at 191913 to 194364 8449 mRNA_82: 8450 - KOG0519 Sensory transduction histidine kinase, at 194842 to 197479 8450 mRNA_83: 8451 - Hypothetical Protein, at 197528 to 201315 8451 mRNA_84: 8452 - K01522 FHIT bis(5'-adenosyl)-triphosphatase, at 201823 to 202716 8452 mRNA_85: 8453 - BLAST glutamine synthetase [Sanghuangporus baumii], at 203010 to 204516 8453
Group Condition mRNA_81 mRNA_82 mRNA_83 mRNA_84 mRNA_85
8449
8450
8451
8452
8453
facs on lipid accumulation Sorted No BODIPY Gate -1.5 0.1 0.1 -1.8 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 0.1 -0.5 -2.7 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 -0.1 -0.5 0.2 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -1.3 -0.0 -0.0 -0.3 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -1.3 -0.2 -0.4 0.6 -0.0
growth on oleic acid YNB Oleic Acid -0.5 0.1 0.4 -1.0 0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 0.2 -0.1 -1.2 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.0 0.0 -0.7 0.1
growth on oleic acid YNB Glucose -0.2 0.1 0.1 -0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.3 0.1 0.3 -0.6 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.2 -0.0 -0.5 -0.0
auxotrophy YNB Glucose -0.5 0.0 -0.0 0.6 -0.2
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.1 -0.2 0.6 -0.4
auxotrophy Dropout Complete -0.5 0.1 -0.1 0.9 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1 0.1 -0.0 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.7 -0.0 -0.0 -0.5 -0.0
growth on ypd YPD -0.0 0.2 0.2 -0.2 0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0 -0.0 0.5 -0.0
growth on ricinoleic acid YNB Glucose -0.2 0.1 -0.3 1.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 0.1 0.1 0.2 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 0.1 0.3 -0.4 0.1
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