Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_80: 8448 - K04911 KCNH8 potassium voltage-gated channel Eag-related subfamily H member 8, at 189215 to 191649 8448 mRNA_81: 8449 - K12176 COPS2, CSN2, TRIP15 COP9 signalosome complex subunit 2, at 191913 to 194364 8449 mRNA_82: 8450 - KOG0519 Sensory transduction histidine kinase, at 194842 to 197479 8450 mRNA_83: 8451 - Hypothetical Protein, at 197528 to 201315 8451 mRNA_84: 8452 - K01522 FHIT bis(5'-adenosyl)-triphosphatase, at 201823 to 202716 8452
Group Condition mRNA_80 mRNA_81 mRNA_82 mRNA_83 mRNA_84
8448
8449
8450
8451
8452
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 0.3 0.1 -0.5 -2.7
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -1.5 0.1 0.1 -1.8
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -1.3 -0.0 -0.0 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 -1.3 -0.2 -0.4 0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.3 -0.0 0.0 -0.7
growth on oleic acid YNB Oleic Acid -0.0 -0.5 0.1 0.4 -1.0
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.3 0.1 0.3 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.7 -0.1 -0.5 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 0.2 0.2 -0.1 -1.2
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.0 0.2 -0.0 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 0.1 0.1 -0.0
growth on oleic acid YNB Glucose 0.1 -0.2 0.1 0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.7 -0.0 -0.0 -0.5
auxotrophy YNB Glucose 0.2 -0.5 0.0 -0.0 0.6
auxotrophy Dropout Complete -0.0 -0.5 0.1 -0.1 0.9
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.1 -0.0 -0.0 0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.5 0.1 0.3 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 0.0 0.1 0.1 0.2
auxotrophy YNB Glucose 75mM Arginine 0.2 0.0 -0.1 -0.2 0.6
growth on ricinoleic acid YNB Glucose 0.1 -0.2 0.1 -0.3 1.1
growth on ypd YPD 0.6 -0.0 0.2 0.2 -0.2
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