Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_75: 8443 - K00606 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 180761 to 182108 8443 mRNA_76: 8444 - K18164 NDUFAF7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7, at 182247 to 184330 8444 mRNA_77: 8445 - K13121 FRA10AC1 protein FRA10AC1, at 184388 to 185510 8445 mRNA_78: 8446 - HMMPfam-NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4)-PF07225, at 185623 to 186207 8446 mRNA_79: 8447 - K04906 KCNH3 potassium voltage-gated channel Eag-related subfamily H member 3, at 186706 to 188932 8447
Group Condition mRNA_75 mRNA_76 mRNA_77 mRNA_78 mRNA_79
8443
8444
8445
8446
8447
growth on oleic acid YNB Glucose 0.1       -0.9
growth on ypd YPD 0.0       -0.7
ypd buoyancy 40 hrs No Buoyancy Separation -0.5       0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.2       -0.4
growth on ricinoleic acid YNB Glucose 0.0       -0.2
growth on oleic acid YNB Oleic Acid 0.3       -0.3
auxotrophy YNB Glucose 75mM Methionine 0.3       -0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.3       -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2       0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1       0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.0       0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0       0.2
auxotrophy YNB Glucose 0.5       -0.2
auxotrophy Dropout Complete 0.4       -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3       -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0       0.3
auxotrophy YNB Glucose 75mM Arginine 0.6       -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5       0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4       0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6       0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.6       0.2
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