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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_75: 8443 - K00606 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 180761 to 182108
8443
mRNA_76: 8444 - K18164 NDUFAF7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7, at 182247 to 184330
8444
mRNA_77: 8445 - K13121 FRA10AC1 protein FRA10AC1, at 184388 to 185510
8445
mRNA_78: 8446 - HMMPfam-NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4)-PF07225, at 185623 to 186207
8446
mRNA_79: 8447 - K04906 KCNH3 potassium voltage-gated channel Eag-related subfamily H member 3, at 186706 to 188932
8447
Group
Condition
mRNA_75
mRNA_76
mRNA_77
mRNA_78
mRNA_79
8443
8444
8445
8446
8447
growth on oleic acid
YNB Glucose
0.1
-0.9
growth on ypd
YPD
0.0
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.4
growth on ricinoleic acid
YNB Glucose
0.0
-0.2
growth on oleic acid
YNB Oleic Acid
0.3
-0.3
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.2
auxotrophy
YNB Glucose
0.5
-0.2
auxotrophy
Dropout Complete
0.4
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.0
0.3
auxotrophy
YNB Glucose 75mM Arginine
0.6
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.5
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.6
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.6
0.2
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