Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_74: 8442 - KOG3600 Thyroid hormone receptor-associated protein complex, subunit TRAP240, at 174089 to 180350 8442 mRNA_75: 8443 - K00606 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 180761 to 182108 8443 mRNA_76: 8444 - K18164 NDUFAF7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7, at 182247 to 184330 8444 mRNA_77: 8445 - K13121 FRA10AC1 protein FRA10AC1, at 184388 to 185510 8445 mRNA_78: 8446 - HMMPfam-NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4)-PF07225, at 185623 to 186207 8446
Group Condition mRNA_74 mRNA_75 mRNA_76 mRNA_77 mRNA_78
8442
8443
8444
8445
8446
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.5      
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 0.2      
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.1      
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.0      
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2      
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0      
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.0      
facs on lipid accumulation Sorted High BODIPY Gate -0.3 0.3      
growth on ypd YPD -0.0 0.0      
growth on ricinoleic acid YNB Glucose 0.1 0.0      
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 0.3      
growth on oleic acid YNB Glucose 0.1 0.1      
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.4      
growth on oleic acid YNB Oleic Acid 0.1 0.3      
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.5      
auxotrophy YNB Glucose 75mM Methionine 0.1 0.3      
auxotrophy Dropout Complete -0.0 0.4      
auxotrophy YNB Glucose -0.0 0.5      
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.6      
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 0.6      
auxotrophy YNB Glucose 75mM Arginine -0.1 0.6      
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