Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_65: 8433 - K12882 NCBP1, CBP80 nuclear cap-binding protein subunit 1, at 150773 to 154577 8433 mRNA_66: 8434 - K15118 SLC25A38 solute carrier family 25, member 38, at 154666 to 156000 8434 mRNA_67: 8435 - K05864 PPID, CYPD peptidyl-prolyl isomerase D, at 156273 to 158120 8435 mRNA_68: 8436 - K12599 SKI2, SKIV2L antiviral helicase SKI2, at 158685 to 163751 8436 mRNA_69: 8437 - K03029 PSMD4, RPN10 26S proteasome regulatory subunit N10, at 163948 to 165826 8437
Group Condition mRNA_65 mRNA_66 mRNA_67 mRNA_68 mRNA_69
8433
8434
8435
8436
8437
facs on lipid accumulation Sorted Low BODIPY Gate -2.1 -0.8 -0.1 -0.9 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.7 0.5 -0.0 0.3 -1.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 -1.2 -0.0 -0.4 0.6
facs on lipid accumulation Sorted High BODIPY Gate 0.4 -0.7 0.1 -1.3 -0.3
growth on oleic acid YNB Glucose -0.4 -0.2 0.1 -0.9 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.1 -0.5 0.1 0.0 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.1 0.2 -0.9 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.2 -0.1 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine 0.6 -0.1 -0.1 -1.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 0.0 0.1 -0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.4 -0.2 0.2 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine 1.1 -0.3 -0.3 -0.9 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.1 0.0 -0.6 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6 -0.5 -0.1 -0.3 0.4
ypd buoyancy 40 hrs Low Buoyancy 0.4 -0.1 0.0 0.0 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.2 -0.1 -0.1 0.3
auxotrophy YNB Glucose 1.3 -0.1 -0.2 -0.7 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -1.3 0.4 -0.2 1.3 0.1
auxotrophy Dropout Complete 1.4 -0.2 0.1 -0.9 0.1
growth on ricinoleic acid YNB Glucose 1.1 0.5 -0.0 -0.7 -0.0
growth on ypd YPD -0.3 0.4 0.3 0.6 -0.0
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