Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_63: 8431 - K01800 maiA, GSTZ1 maleylacetoacetate isomerase, at 147081 to 148199 8431 mRNA_64: 8432 - HMMPfam-Transcription initiation factor TFIID component TAF4 family-PF05236, at 148573 to 150625 8432 mRNA_65: 8433 - K12882 NCBP1, CBP80 nuclear cap-binding protein subunit 1, at 150773 to 154577 8433 mRNA_66: 8434 - K15118 SLC25A38 solute carrier family 25, member 38, at 154666 to 156000 8434 mRNA_67: 8435 - K05864 PPID, CYPD peptidyl-prolyl isomerase D, at 156273 to 158120 8435
Group Condition mRNA_63 mRNA_64 mRNA_65 mRNA_66 mRNA_67
8431
8432
8433
8434
8435
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.3 -2.1 -0.8 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -1.6 -0.7 -1.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.8 -1.1 -0.5 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.6 -1.3 0.4 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 -0.8 -0.5 0.0 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.8 0.2 -0.1 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.6 0.6 -0.5 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.1 0.4 -0.7 0.1
growth on oleic acid YNB Oleic Acid -0.3 0.1 -0.4 -0.2 0.2
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.0 -0.2 -0.2 -0.1
growth on oleic acid YNB Glucose 0.1 -0.0 -0.4 -0.2 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5 0.5 -1.7 0.5 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.5 0.4 -0.1 0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.1 0.2 -0.1 0.2
auxotrophy YNB Glucose 75mM Arginine 0.0 0.1 0.6 -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.4 0.4 0.2 -0.2 -0.1
growth on ricinoleic acid YNB Glucose -0.0 -0.5 1.1 0.5 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.2 0.4 1.1 -0.3 -0.3
auxotrophy YNB Glucose 0.0 0.4 1.3 -0.1 -0.2
auxotrophy Dropout Complete 0.2 -0.0 1.4 -0.2 0.1
growth on ypd YPD 0.5 0.7 -0.3 0.4 0.3
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