Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_61: 8429 - SUPERFAMILY--SSF52047, at 143371 to 144965 8429 mRNA_62: 8430 - HMMPfam-HPP family-PF04982, at 145631 to 146829 8430 mRNA_63: 8431 - K01800 maiA, GSTZ1 maleylacetoacetate isomerase, at 147081 to 148199 8431 mRNA_64: 8432 - HMMPfam-Transcription initiation factor TFIID component TAF4 family-PF05236, at 148573 to 150625 8432 mRNA_65: 8433 - K12882 NCBP1, CBP80 nuclear cap-binding protein subunit 1, at 150773 to 154577 8433
Group Condition mRNA_61 mRNA_62 mRNA_63 mRNA_64 mRNA_65
8429
8430
8431
8432
8433
ypd buoyancy 40 hrs No Buoyancy Separation -1.1 -0.2 -0.3 -0.6 -1.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.0 -0.5 -0.3 -2.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.3 0.0 -1.6 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.0 0.3 -0.8 -1.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.2 -0.3 -0.8 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 -0.4 0.0 -0.8 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 -0.3 0.5 0.5 -1.7
growth on oleic acid YNB Oleic Acid 0.3 -0.1 -0.3 0.1 -0.4
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.4 0.0 -0.5 0.4
growth on oleic acid YNB Glucose -0.1 0.3 0.1 -0.0 -0.4
ypd buoyancy 40 hrs High Buoyancy 0.0 0.1 0.1 -0.0 -0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.1 -0.4 -0.1 0.4
growth on ypd YPD -0.6 0.1 0.5 0.7 -0.3
growth on ricinoleic acid YNB Glucose -0.2 0.0 -0.0 -0.5 1.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.7 -0.0 -0.0 -0.6 0.6
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.1 0.0 0.1 0.6
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.1 0.4 0.4 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.4 0.2 0.0 0.1 0.2
auxotrophy Dropout Complete -0.2 0.2 0.2 -0.0 1.4
auxotrophy YNB Glucose -0.1 0.1 0.0 0.4 1.3
auxotrophy YNB Glucose 75mM Methionine 0.3 0.1 0.2 0.4 1.1
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